Should groundwater models from environmental evaluations be done in open source software?

The topic of open source software and environmental assessments has some interesting associations. For example, if an investment project delivers a groundwater model in Xflow software, the environmental evaluator needs an Xflow license in order to open the model, review the simulations, and report on their observations. But what about civil society? or the communities that have an interest in knowing how the model is built or in the results of the predictive simulations, do these people also need an Xflow license? And what happens if another regulator wants to review the model, can they do so or they can only ask for a technical opinion?

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Hatarilabs presents its study area for integrated and sustainable groundwater management

Because field work and numerical models are just tools for the sustainable management of our groundwater resources we have searched a study place to develop a long-term project on a high-stressed aquifer that will lead to sustainable and effective groundwater policies. The study area is an alluvial aquifer that was primarily used for agriculture production with an neighboring unplanned urban development that has increased the domestic / industrial water demand. Several pumping schemas were implemented on the area and have affected the groundwater levels and the water availability for agriculture.

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Review of the latest functionalities of the new release of MODFLOW 6 (mf6.2.0)

Modflow6 is the latest version of the USGS code for groundwater modeling MODFLOW. This version has been coupled with another USGS open source software as Model Muse and Flopy and can implement diverse spatial discretization structures on a complete rearrangement of packages and keywords. We feel that there is a gap on the capabilities from a common groundwater modeler to adopt all the new development on Modflow and other open source groundwater software therefore we have prepared a video with the summary of this new release.

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Basic tutorial of geological modeling with Python and Gempy

Gempy is an open-source library for modeling geology written in Python. The library is capable of creating complex 3D geological models including structures, fault networks, and unconformities and it can be coupled with uncertainty analysis.

We have created a tutorial of geological modeling based on geological contacts and surface orientations. The tutorial was developed in a Gempy container that runs under Docker in Windows 10; the tutorial covers the software installation and the geological modeling scripting.

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A comprehensive list of specific Python packages for hydrogeology and groundwater modeling

Development of open source software brings amazing new tools in all fields. In hydrogeology and groundwater modeling there is an increasing number of specific open source software and programming packages. We wanted to compile the latest libraries for Python related to hydrogeology, we asked for references and researched over the web to provide you the following list.

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Modeling impermeable walls with MODFLOW 6 and HFB Package - Tutorial

Modeling the performance and effectiveness of flow barriers or impermeable walls on the groundwater flow regime is a challenge due to the wall geometry / orientation and discretization requirements. The package Horizontal Flow Barrier was designed to simulate barriers of defined thickness and conductances that are located in between flow cells, in this way the flow barrier is independent for the model discretization. This package is not new, it dates back to 1993, and it was implemented on many MODFLOW versions.

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Strategies for a hydrogeologist to develop advanced open source groundwater modeling software

There are some shining moments in live where a normal hydrogeologist decide to develop open source software for groundwater modeling and for every great task everyone needs an strategy.

You might need a plan to develop your hydrogeological career but you will certainly need an strategy to develop groundwater modeling software. We have to see a strategy as the optimization of steps towards a goal, from great strategists as Hannibal Barca against the Roman empire, we need to see the whole picture and then decide the best steps to take with the resource available.

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Tutorial to create a geospatial Voronoi-sh mesh with Python, Scipy and Geopandas

Divide a continuous media as a hydrological / hydrogeological basin into discrete parts is an art. Cell size have to related to hydrological features, cell number have to be optimized to cover areas of interest with an adequate refinement while minimizing the total cell number. The computational process has be fast to allow user run multiple times to achieve a desired mesh.

We have done a tutorial that creates a Voronoi-sh mesh over shapefiles with several options for refinement and polygon relaxation, resulting polygons are clipped to the mesh boundary and exported as shapefile or geojson. The script was done with Python, Scipy, and Geopandas.

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Are hydrogeologist - numerical modelers limited without programming?

A great question came when we deal with numerical modeling in modern times or in the last 5 years, and that question is how much programming skills should a hydrogeologist - numerical modeler have? This question is above this one: Should a hydrogeologist - numerical modeler need to program in any language?

As a part of an socratic method attempt to answer this, we will split the question into some subquestions.

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8 Tutorials of Contaminant Transport Modeling in Modflow and MT3DMS / MT3D

Groundwater remediation is a challenge for stakeholders, scientists and population due to the limited baselines, high uncertainty, limited budgets and timeframes, and not so strong modeling capabilities of related professionals on a general scope (don’t take it personal). We might think about the success of groundwater remediation when we achieve a big group - more than a hundred per country - of geoscientists whit high skills on groundwater modeling distributed on the private sector, the regulatory sector and academia.

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Groundwater modeling tutorial in MODFLOW 6 with regional flow, lakes, rives and piezometers

We have developed an applied groundwater modeling case on the mesoscale that covers the most relevant physical process that affect the underground flow regime. Numerical simulation was constructed on Modflow 6 and Model Muse 4 on steady state conditions with variable hydraulic conductivity with depth to represent interbedded low conductivity layers. The tutorial cover all the steps of model and boundary condition setup, working with spatial data, analysis of water balance and review of water levels on piezometers.

Note: This is a base case for a coming webinar in sensibility analysis with MODFLOW 6, Python and the Flopy and Salib libraries. More information of this event will be posted on our social networks.

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How to insert Piezometers (HOB) into a Regional Modflow 6 Model and plot Observed - Calculated Heads

This tutorial has the complete process to insert piezometers as a HOB package into a regional groundwater flow in Modflow6. Original location, surface elevation and screen elevation are in csv format that was converted to shapefile in order to be imported by Model Muse 4. The tutorial also covers a Python script to represent the plot of calculated-observed heads with the NRMSE value as a header.

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Web 3D Representation of a MODFLOW Model with Hataripy, Paraview and Steno3D

Groundwater can’t be seen (because its on the ground, obviously) and groundwater flow is extremely hard to understand unless we have a bigger scope of the theory and main features of the hydrogeological flow regime. One of the limitations for the understanding is the lack of interactive tools that provides user friendly environments for the representation of recharge zones, discharge zones, wells, wetlands, and other hydrogeological features.

We have developed a tutorial for the web representation of a MODFLOW model main features and head results in a combined process with the use of the Hataripy library, Paraview, Python and Steno3D.

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Geochemical Speciation Modeling and Analysis with Phreeqc and Julia - Tutorial

The speciation modeling allows to calculate the distribution of aqueous species in a solution. Phreeqc is capable to simulate this speciation calculation and we are going to demonstrate this capability on a study case of aqueous species in seawater. Modeling was done with a Phreeqc executable and results were analysed on a interactive Julia script. Both parts were done on a Jupyter Lab session.

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Websites where you can download complete groundwater flow models in MODFLOW

Learning groundwater modeling is a challenge for the complexities of the codes, the lack or scarce piezometric and water quality data, the heterogeneity of the porous media and the few resources to explore complete and applied groundwater models with different boundary conditions and predictive scenarios.

Just few websites had uploaded complete groundwater flow models in MODFLOW and are accessible to the general public. We have to admit that most of the websites come from public institutions in the US. We hope that in a near future we can have more resources to get model reports and the complete MODFLOW model.

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Unofficial MODFLOW flow and transport executables for Linux (Ubuntu tested)

It might be that you are a talented groundwater modeler and very proficient with Python and Flopy that you start to realize that you don´t need to work in Windows anymore and want to migrate your favorite groundwater modeling code to other nice, soft, and warm Linux-based operating systems. Or, it might be the case that you want to configure and run MODFLOW models as a part of a webapp or in a web server. For the reasons mentioned before and other reasons that modern world could bring to us, a compiled version of MODFLOW in Linux is needed.

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Temporal discretization impact on MODFLOW Model Heads and Water Budget

For a transient model, a modeler needs to conceptualize a coherent and feasible time discretization approach, nevertheless searching for temporal discretization guidelines the Internet gives you digital noise: nothing relevant, nothing precise, nothing useful. These is the type of situation where you ask yourself: how many stress periods do I need, how many time steps do I require, which should be an appropriate size of the model output, or more important, will the size and number of stress periods and time steps have an effect on the model output?

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How to do more Groundwater Modeling (or any modeling) in less amount of time

Because time matters and everybody wants results and solutions now, groundwater modelers (or any water resources modeler) have to think how they can do more with the limited time available. This is a restructuration, a reengineering, a new conceptualization of not only what we do, but how we do, and if in the end we are happy with the main results, and secondary results we get from our modeling work.

Groundwater modelers are water resources specialists with high skills in computing, coding, maths and groundwater flow regime comprehension. The type of work, the complexity of the given areas of study, the limited observation data, the limited budget, the short completion times and the overall low perception and low understanding of groundwater flow and groundwater quality makes the modeling work somehow particular where we have to adopt special techniques to deliver good work while preserving the modeler integrity and wellness.

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The soft and hard courses every Applied Hydrogeology Master Program should have

There isn’t as well a clear definition of applied hydrogeology, that following the literal meaning should be the hydrogeology in practice. We like the definition of applied hydrogeology as the real world hydrogeology, as the hydrogeology of non-homogeneous, non-infinite, non-isotropic and even non-porous media; applied hydrogeology is the hydrogeology that goes behind the book, far away from the “aquifer, aquitard, aquiclude” classification. Applied hydrogeology is the part of hydrogeology that solve problems, the science that tells us if the groundwater remediation will work, if a industrial complex will have water on the coming decade, or when the salinitization from the pumping well will overcome the reverse osmosis plant capacity.

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6 aquifers that every hydrogeologist should visit on a lifetime

Perception and interest on the groundwater resources are of high initial interest but long term low popularity, that is why normal and plain hydrogeologist need to promote an innovative perspective of the relation from human society with the groundwater resources as a strong part for every environmental protection plan and sustainable management policy elaboration.

This article has a list of aquifers around the globe, with special characteristics where a normal audience can see how water can exist below surface, how people have interacted with the aquifer

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